Files changed: - AGENTS.md - CHANGES.md - VERSION - instructions/CONTRACT.md - instructions/capture-session.md - instructions/claude-code-model-selection.md - instructions/dev/issue-tracking.md - instructions/dev/testing-conventions.md - instructions/dev/version-parts.md - instructions/evolve-subtypes.md - instructions/gates.md - instructions/german-terminology.md - instructions/ingest-large-tree.md - instructions/kb-profiles.md - instructions/link-taxonomy.md - instructions/mcp-read-server.md - instructions/migrate-corpus.md - instructions/migrations/3.0.0-authoring-conventions.md - instructions/migrations/4.0.0-link-taxonomy.md - instructions/private-instance.md - instructions/session-setup.md - instructions/setup-instance.md - kb/CONTRACT.md - kb/CONVENTIONS.md - kb/concepts/COLLECTION.md - raw/CONTRACT.md - tools/CONTRACT.md - tools/chemenu/commands/docs_verify.py - tools/chemenu/commands/instructions_cmd.py - tools/chemenu/tests/test_docs_verify.py - tools/chemenu/tests/test_instructions_cmd.py - tools/chemenu/tests/test_toc.py - tools/chemenu/toc.py - types/type-spec.md
Files changed: - .gitignore - CHANGES.md - EVALS.md - INSTALL.md - README.md - VERSION - docs/pipeline-rationale.md - instructions/CONTRACT.md - instructions/bootstrap.md - instructions/dev/issue-tracking.md - instructions/evolve-subtypes.md - instructions/kb-profiles.md - instructions/mcp-read-server.md - instructions/wiki-ingest/SKILL.md - kb/CONTRACT.md - kb/concepts/COLLECTION.md - kb/sources/COLLECTION.md - raw/CONTRACT.md - tools/.coveragerc - tools/CONTRACT.md - tools/README.md - tools/chemenu/commands/docs_verify.py - tools/chemenu/tests/test_docs_verify.py - types/source.schema.yaml - types/type-spec.md
Files changed: - CHANGES.md - VERSION - instructions/evolve-subtypes.md - instructions/kb-profiles.md - instructions/setup-instance.md - kb/sources/COLLECTION.md